| intron9: | 73.3% | View Detail |
########################################
# Program: needle
# Rundate: Mon 4 Mar 2019 09:12:01
# Commandline: needle
# -auto
# -stdout
# -asequence emboss_needle-R20190304-091156-0200-74845144-p2m.asequence
# -bsequence emboss_needle-R20190304-091156-0200-74845144-p2m.bsequence
# -gapopen 10.0
# -gapextend 0.5
# -endopen 10.0
# -endextend 0.5
# -aformat3 pair
# Align_format: pair
# Report_file: stdout
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: EMBOSS_001
# 2: EMBOSS_001
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3844
# Identity: 2818/3844 (73.3%)
# Similarity: 2818/3844 (73.3%)
# Gaps: 1026/3844 (26.7%)
# Score: 14090.0
#
#
#=======================================
EMBOSS_001 1 GTACTAAGTCTTGGGACCTCTTATCAAGTGGAAAGTTTCCAGTCTAACAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1 GTACTAAGTCTTGGGACCTCTTATCAAGTGGAAAGTTTCCAGTCTAACAC 50
EMBOSS_001 51 TCAAAATGCCGTTTTCTTCTTGACTGTTTTACCTGCAATTGGGGCATTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 51 TCAAAATGCCGTTTTCTTCTTGACTGTTTTACCTGCAATTGGGGCATTTG 100
EMBOSS_001 101 CCATCAGGGGGCAGTGATGCCTCAAAGACAATGGCTCCTGGTTGTAGCTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 101 CCATCAGGGGGCAGTGATGCCTCAAAGACAATGGCTCCTGGTTGTAGCTA 150
EMBOSS_001 151 ACTAACTTCAGAACACCAACTTATACCATAATATATATTTTAAAGGACCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 151 ACTAACTTCAGAACACCAACTTATACCATAATATATATTTTAAAGGACCA 200
EMBOSS_001 201 GACCAGCTTTCAAAAAGAAAATTGTTAAAGAGAGCATGAAAATGGTTCTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 201 GACCAGCTTTCAAAAAGAAAATTGTTAAAGAGAGCATGAAAATGGTTCTA 250
EMBOSS_001 251 TGACTTTGCCTGATACAGATGCTACTTGACTTACGATGGTGTTACTTCCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 251 TGACTTTGCCTGATACAGATGCTACTTGACTTACGATGGTGTTACTTCCT 300
EMBOSS_001 301 GATAAACTCGTCGTAAGTTGAAAATATTGTAAGTTGAAAATGGATTTAAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 301 GATAAACTCGTCGTAAGTTGAAAATATTGTAAGTTGAAAATGGATTTAAT 350
EMBOSS_001 351 ACACCTAATCTAAGGAACATCATAGCTTAGCCTAGCCTGCTTTTTTTTTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 351 ACACCTAATCTAAGGAACATCATAGCTTAGCCTAGCCTGCTTTTTTTTTT 400
EMBOSS_001 401 TTTTTTTTTGGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 401 TTTTTTTTTGGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGT 450
EMBOSS_001 451 GGCGGGATCTCGGCTCACTGCAACCTCCGCCTTCTGGGTTCAAGCGATTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 451 GGCGGGATCTCGGCTCACTGCAACCTCCGCCTTCTGGGTTCAAGCGATTC 500
EMBOSS_001 501 TCCTGCCTCAGCCCACTGAGTAGCTGGGATTACAGGCACCTGCCCCGACG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 501 TCCTGCCTCAGCCCACTGAGTAGCTGGGATTACAGGCACCTGCCCCGACG 550
EMBOSS_001 551 CCCAGCTAATTTTTTGTTATTTATTTATTTTTTTTTTTAGTAGAGATGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 551 CCCAGCTAATTTTTTGTTATTTATTTATTTTTTTTTTTAGTAGAGATGAG 600
EMBOSS_001 601 GTTTCACCATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTTGTGATCTG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 601 GTTTCACCATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTTGTGATCTG 650
EMBOSS_001 651 CCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCAC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 651 CCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCAC 700
EMBOSS_001 701 CCGGCCTGCCTAGCCTACTTTTATTTTATTTTTAATGGAGACAGCATCTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 701 CCGGCCTGCCTAGCCTACTTTTATTTTATTTTTAATGGAGACAGCATCTT 750
EMBOSS_001 751 GCTCTGTTGCCCAGGCTGGATTACAGTGATGTGATCATAGCTCATTATAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 751 GCTCTGTTGCCCAGGCTGGATTACAGTGATGTGATCATAGCTCATTATAC 800
EMBOSS_001 801 CCTCCTGGGCTCAAGCAATCCCCCTAACTCTGCCTCCCCAGTAGCTAGGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 801 CCTCCTGGGCTCAAGCAATCCCCCTAACTCTGCCTCCCCAGTAGCTAGGA 850
EMBOSS_001 851 CCACAGGCATACACCACCATACCCAGCTAATTTTTAAAATTTTTTGTAGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 851 CCACAGGCATACACCACCATACCCAGCTAATTTTTAAAATTTTTTGTAGA 900
EMBOSS_001 901 TAGATAGAGTCTCACTATGTTGCCCAGGCTGGTCTCTAGCCTACTTTTTT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 901 TAGATAGAGTCTCACTATGTTGCCCAGGCTGGTCTCTAGCCTACTTTTTT 950
EMBOSS_001 951 GAGACAAGGTCTTGCTCTGTCACCCAGGCTGGATAGAGTGCAGTAGTGCA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 951 GAGACAAGGTCTTGCTCTGTCACCCAGGCTGGATAGAGTGCAGTAGTGCA 1000
EMBOSS_001 1001 GTCACAGCTCACTGCAGCCTCCACCTCCCAGGCTCCATCCATCCTCCCAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1001 GTCACAGCTCACTGCAGCCTCCACCTCCCAGGCTCCATCCATCCTCCCAG 1050
EMBOSS_001 1051 CTCAGCCTCCCAAGTTGCTTCAACTACAGGCCTGCACCACCATGCCTGGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1051 CTCAGCCTCCCAAGTTGCTTCAACTACAGGCCTGCACCACCATGCCTGGC 1100
EMBOSS_001 1101 TAATTTTTATTTATTTATTTTTATTTTATTTTATTTTATTTTTTTGAGAC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1101 TAATTTTTATTTATTTATTTTTATTTTATTTTATTTTATTTTTTTGAGAC 1150
EMBOSS_001 1151 TCAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1151 TCAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCT 1200
EMBOSS_001 1201 CACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1201 CACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTC 1250
EMBOSS_001 1251 CCGAATAGCTAGGACTACAAGCGCCTGCTACCACGCCCAGCTAATTTTTG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1251 CCGAATAGCTAGGACTACAAGCGCCTGCTACCACGCCCAGCTAATTTTTG 1300
EMBOSS_001 1301 TATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1301 TATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAA 1350
EMBOSS_001 1351 CTTCTGACCATGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1351 CTTCTGACCATGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTA 1400
EMBOSS_001 1401 CAGGTGTGAGCCACCACGCCCGGCTAATTTTTATTTATTTATTTAAAGAC 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1401 CAGGTGTGAGCCACCACGCCCGGCTAATTTTTATTTATTTATTTAAAGAC 1450
EMBOSS_001 1451 AGAGTCTCACTCTGTCACTCAGGCTAGAGTGCAGTGGCACCATCTCAGCT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1451 AGAGTCTCACTCTGTCACTCAGGCTAGAGTGCAGTGGCACCATCTCAGCT 1500
EMBOSS_001 1501 CACTGCAGCCTTGACCTCCCTGGGCTCCGGTGATTTCACCCTCCCAAGTA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1501 CACTGCAGCCTTGACCTCCCTGGGCTCCGGTGATTTCACCCTCCCAAGTA 1550
EMBOSS_001 1551 GCTAGGACTACAGGCACATGCCACGACACCCAGCTAATTTTTTATTTTCT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1551 GCTAGGACTACAGGCACATGCCACGACACCCAGCTAATTTTTTATTTTCT 1600
EMBOSS_001 1601 GTGAAGTCAAGGTCTTGCTACGTTGCCCATGCTGGTATCAAACCCCTGGG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1601 GTGAAGTCAAGGTCTTGCTACGTTGCCCATGCTGGTATCAAACCCCTGGG 1650
EMBOSS_001 1651 CTCAATCAATCCTTCCACCTCAGCCTCCCCAAGTATTGGGGTTACAGGCA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1651 CTCAATCAATCCTTCCACCTCAGCCTCCCCAAGTATTGGGGTTACAGGCA 1700
EMBOSS_001 1701 TGAGCTACCACACTCAGCCCTAGCCTACTTGAAACGTGTTCAGAGCATTT 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1701 TGAGCTACCACACTCAGCCCTAGCCTACTTGAAACGTGTTCAGAGCATTT 1750
EMBOSS_001 1751 AAGTTACCCTACAGTTGGGCAAAGTCATCTAACACAAAGCCCTTTTTATA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1751 AAGTTACCCTACAGTTGGGCAAAGTCATCTAACACAAAGCCCTTTTTATA 1800
EMBOSS_001 1801 GTAATAAAATGTTGTATATCTCATGTGATTTATTGAATATTGTTACTGAA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1801 GTAATAAAATGTTGTATATCTCATGTGATTTATTGAATATTGTTACTGAA 1850
EMBOSS_001 1851 AGTGAGAAACAGCATGGTTGCATGAAAGGAGGCACAGTCGAGCCAGGCAC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1851 AGTGAGAAACAGCATGGTTGCATGAAAGGAGGCACAGTCGAGCCAGGCAC 1900
EMBOSS_001 1901 AGCCTGGGCGCAGAGCGAGACTCAAAAAAAGAAAAGGCCAGGCGCACTGG 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1901 AGCCTGGGCGCAGAGCGAGACTCAAAAAAAGAAAAGGCCAGGCGCACTGG 1950
EMBOSS_001 1951 CTCACGCCTGTAATCCCAGCATTTCGGGAGGCTGAGGCGGGTGGATCACC 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 1951 CTCACGCCTGTAATCCCAGCATTTCGGGAGGCTGAGGCGGGTGGATCACC 2000
EMBOSS_001 2001 TGAGGTCAGGAGTTCAAGACCAGCCTAGCCAACATGGTGAAACCCCGTCT 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2001 TGAGGTCAGGAGTTCAAGACCAGCCTAGCCAACATGGTGAAACCCCGTCT 2050
EMBOSS_001 2051 CTACTAAAATACAAAAATTAACCGGGCGTGATGGCAGGTGCCTGTAATCC 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2051 CTACTAAAATACAAAAATTAACCGGGCGTGATGGCAGGTGCCTGTAATCC 2100
EMBOSS_001 2101 CAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGAGGCGGA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2101 CAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGAGGCGGA 2150
EMBOSS_001 2151 GGTTGCAGGGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGCGATAGA 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2151 GGTTGCAGGGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGCGATAGA 2200
EMBOSS_001 2201 GTGAGACTCCGTCTCAGAAAAAAAAGAAAAGAAACGAGGCACAGTCGCAT 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2201 GTGAGACTCCGTCTCAGAAAAAAAAGAAAAGAAACGAGGCACAGTCGCAT 2250
EMBOSS_001 2251 GCACATGTAGTCCCAGTTACTTGAGAGGCTAAGGCAGGAGGATCTCTTGA 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2251 GCACATGTAGTCCCAGTTACTTGAGAGGCTAAGGCAGGAGGATCTCTTGA 2300
EMBOSS_001 2301 GCCCAAGAGTTTGAGTCCAGCCTGAACAACATAGCAAGACATCATCTCTA 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2301 GCCCAAGAGTTTGAGTCCAGCCTGAACAACATAGCAAGACATCATCTCTA 2350
EMBOSS_001 2351 AAATTTAAAAAAGGGCCGGGCACAGTGGCTCACACCTGTAATCCCAGCAC 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2351 AAATTTAAAAAAGGGCCGGGCACAGTGGCTCACACCTGTAATCCCAGCAC 2400
EMBOSS_001 2401 TTTGGGAGGTGGAGGTGGGTAGATCACCTGACGTCAGGAGTTGGAAACCA 2450
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2401 TTTGGGAGGTGGAGGTGGGTAGATCACCTGACGTCAGGAGTTGGAAACCA 2450
EMBOSS_001 2451 GCCTGGCTAACATGGTGAAGCCCCATCTCTACTAAAAACACAAAAATTAG 2500
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2451 GCCTGGCTAACATGGTGAAGCCCCATCTCTACTAAAAACACAAAAATTAG 2500
EMBOSS_001 2501 CCAGGTGTGGTAGCACACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG 2550
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2501 CCAGGTGTGGTAGCACACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG 2550
EMBOSS_001 2551 CACAAGAATCACTTGAACCCCAGAGGCGGAGATTGCAATCAGCCAAGATT 2600
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2551 CACAAGAATCACTTGAACCCCAGAGGCGGAGATTGCAATCAGCCAAGATT 2600
EMBOSS_001 2601 GCACCATTGCACTCCCGCCTGGGCAACAGAGTGAGACCCCATCTCAAAAT 2650
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2601 GCACCATTGCACTCCCGCCTGGGCAACAGAGTGAGACCCCATCTCAAAAT 2650
EMBOSS_001 2651 AAATAAATAAATATTTTTAAAAGTCAGCTGTATAGGTACTTGAAGTGCAG 2700
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2651 AAATAAATAAATATTTTTAAAAGTCAGCTGTATAGGTACTTGAAGTGCAG 2700
EMBOSS_001 2701 TTTCTACTAAATGCATGTTGCTTTTGTACCGTCATAAAGTCAAACAATTG 2750
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2701 TTTCTACTAAATGCATGTTGCTTTTGTACCGTCATAAAGTCAAACAATTG 2750
EMBOSS_001 2751 TAACTTGAACCATCTTTTAACTCAGGTACTGTGTATATACTTACTTCTCC 2800
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 2751 TAACTTGAACCATCTTTTAACTCAGGTACTGTGTATATACTTACTTCTCC 2800
EMBOSS_001 2801 CCCTCCTCTGTTGCTGCAGATCCGTGGGCGTGAGCGCTTCGAGATGTTCC 2850
||||||||||||||||||
EMBOSS_001 2801 CCCTCCTCTGTTGCTGCA-------------------------------- 2818
EMBOSS_001 2851 GAGAGCTGAATGAGGCCTTGGAACTCAAGGATGCCCAGGCTGGGAAGGAG 2900
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 2901 CCAGGGGGGAGCAGGGCTCACTCCAGGTGAGTGACCTCAGCCCCTTCCTG 2950
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 2951 GCCCTACTCCCCTGCCTTCCTAGGTTGGAAAGCCATAGGATTCCATTCTC 3000
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3001 ATCCTGCCTTCATGGTCAAAGGCAGCTGACCCCATCTCATTGGGTCCCAG 3050
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3051 CCCTGCACAGACATTTTTTTAGTCTTCCTCCGGTTGAATCCTATAACCAC 3100
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3101 ATTCTTGCCTCAGTGTATCCACAGAACATCCAAACCCAGGGACGAGTGTG 3150
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3151 GATACTTCTTTGCCATTCTCCGCAACTCCCAGCCCAGAGCTGGAGGGTCT 3200
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3201 CAAGGAGGGGCCTAATAATTGTGTAATACTGAATACAGCCAGAGTTTCAG 3250
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3251 GTCATATACTCAGCCCTGCCATGCACCGGCAGGTCCTAGGTGACCCCCGT 3300
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3301 CAAACTCAGTTTCCTTATATATAAAATGGGGTAAGGGGGCCGGGCGCAGT 3350
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3351 GGCTCACGAATCCCACACTCTGGGAGGCCAAGGCGAGTGGATCACCTGAG 3400
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3401 GTCGGGAGTTTGAGCCCAGCCTGACCAACATGGAGAAACCCCATCTCTAC 3450
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3451 TAAAAATACAAAAGTAGCCGGGCGTGGTGATGCATGCCTGTAATCCCAGC 3500
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3501 TACCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAG 3550
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3551 AGGTTGCGGTGAGCTGAGATCTCACCATTACACTCCAGCCTGGGCAACAA 3600
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3601 GAGTGAAACTCCGTCTCAAAAAAGATAAATAAAGTAAAATGGGGTAAGGG 3650
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3651 AAGATTACGAGACTAATACACACTAATACTCTGAGGTGCTCAGTAAACAT 3700
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3701 ATTTGCATGGGGTGTGGCCACCATCTTGATTTGAATTCCCGTTGTCCCAG 3750
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3751 CCTTAGGCCCTTCAAAGCATTGGTCAGGGAAAAGGGGCACAGACCCTCTC 3800
EMBOSS_001 2819 -------------------------------------------------- 2818
EMBOSS_001 3801 ACTCATGTGATGTCATCTCTCCTCCCTGCTTCTGTCTCCTACAG 3844
EMBOSS_001 2819 -------------------------------------------- 2818
#---------------------------------------
#---------------------------------------
| ||
| intron10: | 23.9% | View Detail |
########################################
# Program: needle
# Rundate: Mon 4 Mar 2019 09:13:18
# Commandline: needle
# -auto
# -stdout
# -asequence emboss_needle-R20190304-091312-0261-87854276-p1m.asequence
# -bsequence emboss_needle-R20190304-091312-0261-87854276-p1m.bsequence
# -gapopen 10.0
# -gapextend 0.5
# -endopen 10.0
# -endextend 0.5
# -aformat3 pair
# Align_format: pair
# Report_file: stdout
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: EMBOSS_001
# 2: EMBOSS_001
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3844
# Identity: 917/3844 (23.9%)
# Similarity: 917/3844 (23.9%)
# Gaps: 2927/3844 (76.1%)
# Score: 4585.0
#
#
#=======================================
EMBOSS_001 1 GTACTAAGTCTTGGGACCTCTTATCAAGTGGAAAGTTTCCAGTCTAACAC 50
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 51 TCAAAATGCCGTTTTCTTCTTGACTGTTTTACCTGCAATTGGGGCATTTG 100
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 101 CCATCAGGGGGCAGTGATGCCTCAAAGACAATGGCTCCTGGTTGTAGCTA 150
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 151 ACTAACTTCAGAACACCAACTTATACCATAATATATATTTTAAAGGACCA 200
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 201 GACCAGCTTTCAAAAAGAAAATTGTTAAAGAGAGCATGAAAATGGTTCTA 250
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 251 TGACTTTGCCTGATACAGATGCTACTTGACTTACGATGGTGTTACTTCCT 300
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 301 GATAAACTCGTCGTAAGTTGAAAATATTGTAAGTTGAAAATGGATTTAAT 350
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 351 ACACCTAATCTAAGGAACATCATAGCTTAGCCTAGCCTGCTTTTTTTTTT 400
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 401 TTTTTTTTTGGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGT 450
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 451 GGCGGGATCTCGGCTCACTGCAACCTCCGCCTTCTGGGTTCAAGCGATTC 500
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 501 TCCTGCCTCAGCCCACTGAGTAGCTGGGATTACAGGCACCTGCCCCGACG 550
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 551 CCCAGCTAATTTTTTGTTATTTATTTATTTTTTTTTTTAGTAGAGATGAG 600
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 601 GTTTCACCATGTTGGCCAGGCTAGTCTCGAACTCCTGACCTTGTGATCTG 650
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 651 CCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCAC 700
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 701 CCGGCCTGCCTAGCCTACTTTTATTTTATTTTTAATGGAGACAGCATCTT 750
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 751 GCTCTGTTGCCCAGGCTGGATTACAGTGATGTGATCATAGCTCATTATAC 800
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 801 CCTCCTGGGCTCAAGCAATCCCCCTAACTCTGCCTCCCCAGTAGCTAGGA 850
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 851 CCACAGGCATACACCACCATACCCAGCTAATTTTTAAAATTTTTTGTAGA 900
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 901 TAGATAGAGTCTCACTATGTTGCCCAGGCTGGTCTCTAGCCTACTTTTTT 950
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 951 GAGACAAGGTCTTGCTCTGTCACCCAGGCTGGATAGAGTGCAGTAGTGCA 1000
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1001 GTCACAGCTCACTGCAGCCTCCACCTCCCAGGCTCCATCCATCCTCCCAG 1050
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1051 CTCAGCCTCCCAAGTTGCTTCAACTACAGGCCTGCACCACCATGCCTGGC 1100
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1101 TAATTTTTATTTATTTATTTTTATTTTATTTTATTTTATTTTTTTGAGAC 1150
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1151 TCAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCT 1200
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1201 CACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTC 1250
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1251 CCGAATAGCTAGGACTACAAGCGCCTGCTACCACGCCCAGCTAATTTTTG 1300
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1301 TATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAA 1350
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1351 CTTCTGACCATGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTA 1400
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1401 CAGGTGTGAGCCACCACGCCCGGCTAATTTTTATTTATTTATTTAAAGAC 1450
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1451 AGAGTCTCACTCTGTCACTCAGGCTAGAGTGCAGTGGCACCATCTCAGCT 1500
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1501 CACTGCAGCCTTGACCTCCCTGGGCTCCGGTGATTTCACCCTCCCAAGTA 1550
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1551 GCTAGGACTACAGGCACATGCCACGACACCCAGCTAATTTTTTATTTTCT 1600
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1601 GTGAAGTCAAGGTCTTGCTACGTTGCCCATGCTGGTATCAAACCCCTGGG 1650
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1651 CTCAATCAATCCTTCCACCTCAGCCTCCCCAAGTATTGGGGTTACAGGCA 1700
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1701 TGAGCTACCACACTCAGCCCTAGCCTACTTGAAACGTGTTCAGAGCATTT 1750
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1751 AAGTTACCCTACAGTTGGGCAAAGTCATCTAACACAAAGCCCTTTTTATA 1800
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1801 GTAATAAAATGTTGTATATCTCATGTGATTTATTGAATATTGTTACTGAA 1850
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1851 AGTGAGAAACAGCATGGTTGCATGAAAGGAGGCACAGTCGAGCCAGGCAC 1900
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1901 AGCCTGGGCGCAGAGCGAGACTCAAAAAAAGAAAAGGCCAGGCGCACTGG 1950
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 1951 CTCACGCCTGTAATCCCAGCATTTCGGGAGGCTGAGGCGGGTGGATCACC 2000
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2001 TGAGGTCAGGAGTTCAAGACCAGCCTAGCCAACATGGTGAAACCCCGTCT 2050
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2051 CTACTAAAATACAAAAATTAACCGGGCGTGATGGCAGGTGCCTGTAATCC 2100
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2101 CAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGAGGCGGA 2150
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2151 GGTTGCAGGGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGCGATAGA 2200
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2201 GTGAGACTCCGTCTCAGAAAAAAAAGAAAAGAAACGAGGCACAGTCGCAT 2250
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2251 GCACATGTAGTCCCAGTTACTTGAGAGGCTAAGGCAGGAGGATCTCTTGA 2300
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2301 GCCCAAGAGTTTGAGTCCAGCCTGAACAACATAGCAAGACATCATCTCTA 2350
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2351 AAATTTAAAAAAGGGCCGGGCACAGTGGCTCACACCTGTAATCCCAGCAC 2400
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2401 TTTGGGAGGTGGAGGTGGGTAGATCACCTGACGTCAGGAGTTGGAAACCA 2450
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2451 GCCTGGCTAACATGGTGAAGCCCCATCTCTACTAAAAACACAAAAATTAG 2500
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2501 CCAGGTGTGGTAGCACACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG 2550
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2551 CACAAGAATCACTTGAACCCCAGAGGCGGAGATTGCAATCAGCCAAGATT 2600
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2601 GCACCATTGCACTCCCGCCTGGGCAACAGAGTGAGACCCCATCTCAAAAT 2650
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2651 AAATAAATAAATATTTTTAAAAGTCAGCTGTATAGGTACTTGAAGTGCAG 2700
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2701 TTTCTACTAAATGCATGTTGCTTTTGTACCGTCATAAAGTCAAACAATTG 2750
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2751 TAACTTGAACCATCTTTTAACTCAGGTACTGTGTATATACTTACTTCTCC 2800
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2801 CCCTCCTCTGTTGCTGCAGATCCGTGGGCGTGAGCGCTTCGAGATGTTCC 2850
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2851 GAGAGCTGAATGAGGCCTTGGAACTCAAGGATGCCCAGGCTGGGAAGGAG 2900
EMBOSS_001 1 -------------------------------------------------- 0
EMBOSS_001 2901 CCAGGGGGGAGCAGGGCTCACTCCAGGTGAGTGACCTCAGCCCCTTCCTG 2950
||||||||||||||||||||||||
EMBOSS_001 1 --------------------------GTGAGTGACCTCAGCCCCTTCCTG 24
EMBOSS_001 2951 GCCCTACTCCCCTGCCTTCCTAGGTTGGAAAGCCATAGGATTCCATTCTC 3000
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 25 GCCCTACTCCCCTGCCTTCCTAGGTTGGAAAGCCATAGGATTCCATTCTC 74
EMBOSS_001 3001 ATCCTGCCTTCATGGTCAAAGGCAGCTGACCCCATCTCATTGGGTCCCAG 3050
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 75 ATCCTGCCTTCATGGTCAAAGGCAGCTGACCCCATCTCATTGGGTCCCAG 124
EMBOSS_001 3051 CCCTGCACAGACATTTTTTTAGTCTTCCTCCGGTTGAATCCTATAACCAC 3100
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 125 CCCTGCACAGACATTTTTTTAGTCTTCCTCCGGTTGAATCCTATAACCAC 174
EMBOSS_001 3101 ATTCTTGCCTCAGTGTATCCACAGAACATCCAAACCCAGGGACGAGTGTG 3150
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 175 ATTCTTGCCTCAGTGTATCCACAGAACATCCAAACCCAGGGACGAGTGTG 224
EMBOSS_001 3151 GATACTTCTTTGCCATTCTCCGCAACTCCCAGCCCAGAGCTGGAGGGTCT 3200
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 225 GATACTTCTTTGCCATTCTCCGCAACTCCCAGCCCAGAGCTGGAGGGTCT 274
EMBOSS_001 3201 CAAGGAGGGGCCTAATAATTGTGTAATACTGAATACAGCCAGAGTTTCAG 3250
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 275 CAAGGAGGGGCCTAATAATTGTGTAATACTGAATACAGCCAGAGTTTCAG 324
EMBOSS_001 3251 GTCATATACTCAGCCCTGCCATGCACCGGCAGGTCCTAGGTGACCCCCGT 3300
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 325 GTCATATACTCAGCCCTGCCATGCACCGGCAGGTCCTAGGTGACCCCCGT 374
EMBOSS_001 3301 CAAACTCAGTTTCCTTATATATAAAATGGGGTAAGGGGGCCGGGCGCAGT 3350
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 375 CAAACTCAGTTTCCTTATATATAAAATGGGGTAAGGGGGCCGGGCGCAGT 424
EMBOSS_001 3351 GGCTCACGAATCCCACACTCTGGGAGGCCAAGGCGAGTGGATCACCTGAG 3400
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 425 GGCTCACGAATCCCACACTCTGGGAGGCCAAGGCGAGTGGATCACCTGAG 474
EMBOSS_001 3401 GTCGGGAGTTTGAGCCCAGCCTGACCAACATGGAGAAACCCCATCTCTAC 3450
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 475 GTCGGGAGTTTGAGCCCAGCCTGACCAACATGGAGAAACCCCATCTCTAC 524
EMBOSS_001 3451 TAAAAATACAAAAGTAGCCGGGCGTGGTGATGCATGCCTGTAATCCCAGC 3500
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 525 TAAAAATACAAAAGTAGCCGGGCGTGGTGATGCATGCCTGTAATCCCAGC 574
EMBOSS_001 3501 TACCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAG 3550
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 575 TACCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAG 624
EMBOSS_001 3551 AGGTTGCGGTGAGCTGAGATCTCACCATTACACTCCAGCCTGGGCAACAA 3600
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 625 AGGTTGCGGTGAGCTGAGATCTCACCATTACACTCCAGCCTGGGCAACAA 674
EMBOSS_001 3601 GAGTGAAACTCCGTCTCAAAAAAGATAAATAAAGTAAAATGGGGTAAGGG 3650
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 675 GAGTGAAACTCCGTCTCAAAAAAGATAAATAAAGTAAAATGGGGTAAGGG 724
EMBOSS_001 3651 AAGATTACGAGACTAATACACACTAATACTCTGAGGTGCTCAGTAAACAT 3700
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 725 AAGATTACGAGACTAATACACACTAATACTCTGAGGTGCTCAGTAAACAT 774
EMBOSS_001 3701 ATTTGCATGGGGTGTGGCCACCATCTTGATTTGAATTCCCGTTGTCCCAG 3750
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 775 ATTTGCATGGGGTGTGGCCACCATCTTGATTTGAATTCCCGTTGTCCCAG 824
EMBOSS_001 3751 CCTTAGGCCCTTCAAAGCATTGGTCAGGGAAAAGGGGCACAGACCCTCTC 3800
||||||||||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 825 CCTTAGGCCCTTCAAAGCATTGGTCAGGGAAAAGGGGCACAGACCCTCTC 874
EMBOSS_001 3801 ACTCATGTGATGTCATCTCTCCTCCCTGCTTCTGTCTCCTACAG 3844
|||||||||||||||||||||||||||||||||||||||||||
EMBOSS_001 875 ACTCATGTGATGTCATCTCTCCTCCCTGCTTCTGTCTCCTACA- 917
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